Browse of TCMCG016C13340 protein

CDS

Accession Number	TCMCG016C13340
gbkey	CDS
Protein Id	OMO78662.1
Location	join(6793..6987,7108..7284,7370..7540,7644..7825,7929..8175,8327..8462,8688..9151,9313..9549,10132..10246,11518..11670,11788..12183,12285..12361,12896..13581,13736..13804,15134..15249,15425..15577,15863..16165,16258..16334,16468..17289,17761..17955,18049..18198,18283..18339,18439..18537,18639..18734,18960..19044,19181..19233,19401..19484,19620..19730,19895..19960)
Organism	Corchorus capsularis
locus_tag	CCACVL1_14213

Protein

Length	1923aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source	AWWV01010532.1
Definition	hypothetical protein CCACVL1_14213 [Corchorus capsularis]
Locus_tag	CCACVL1_14213

EGGNOG-MAPPER Annotation

COG_category	L
Description	Flap endonuclease GEN-like
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko03400        [VIEW IN KEGG]
KEGG_ko	ko:K15338        [VIEW IN KEGG]
EC	-
KEGG_Pathway	-
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003677        [VIEW IN EMBL-EBI] GO:0003690        [VIEW IN EMBL-EBI] GO:0003697        [VIEW IN EMBL-EBI] GO:0003824        [VIEW IN EMBL-EBI] GO:0004518        [VIEW IN EMBL-EBI] GO:0004519        [VIEW IN EMBL-EBI] GO:0004520        [VIEW IN EMBL-EBI] GO:0004536        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006259        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0007275        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0008821        [VIEW IN EMBL-EBI] GO:0009555        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0016787        [VIEW IN EMBL-EBI] GO:0016788        [VIEW IN EMBL-EBI] GO:0016889        [VIEW IN EMBL-EBI] GO:0016894        [VIEW IN EMBL-EBI] GO:0032501        [VIEW IN EMBL-EBI] GO:0032502        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044260        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0048229        [VIEW IN EMBL-EBI] GO:0048256        [VIEW IN EMBL-EBI] GO:0048856        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0090305        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:0140097        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGGGGTGGGAGGGAATTTCTGGGAACTTTTAAAACCCTATGCTAGGCAAGAGGGATTCGATTTCTTGAGAGACAAAAGGGTTGCCGTTGATCTCTCCTATTGGATAGTCCAACACGAGACTGCAATCAAGAATCAAGCTACTAATCCTCATCTCAGACTTACTTTCTTTCGCACCATTAACCTTATATCTAAGTTTGGAGCGTTTCCGGTGTTTATCTTGGATGGAATTCCGTCGCCGTTGAAATCTCAAGCAAGGATTGCTCGGTTTTTCCGTTTCTCTGGCATTGATACTTCAACTTTGACTGTGGTCAAGGAGGGTGTCTCCAAAGAGAGGAACTCAGCCTTCTTAAAATATGTAAAAGACTGTGTGGAGCTGCTTGAATTAATGGGAATGCCAGTGCTGAAAGCAAAAGGGGAGGCCGAAGCATTATGTGCTCAGTTGAATAAAGACGGTTATGTAGATGCTTGTATTACAGCTGACAGTGATGCATTCCTCTTTGGGGCTACTTGTGTTATTAAATGTCTTAGGCCTAATTCAAAAGAACCAATTGAATGCTACCGTATGTCAGATATTGAAGCAGGTCTTGGACTAAAGAGGAAACACTTAATAGCCATCTCTCTTTTGGTTGGAAATGATCATGACCTAAAGGGGGTGCAAGGGATTGGTCTTGATAAAGCACTTCGTTTTGTACGAAAATTTAGTGAAGATGAGATATTGGATAAATTATGTCAAATAGGGAAAGGGGATTTACCGCTATTTCAGGATGGAATTATATGTATGGGTGATGTTACACCTTGTTTGGATGATTGCTCACCAAAGCCAAAACAATCTCATTGTTCCTTCTGCGGGCACCCTGGCAGCAAGAAATCTCACCTCAAGTTTTCCTGTGAATATTGTCTCACTGATAGTAATGTGGGTTGCTTGAAAAAGTCACCCAACTTTAAGTGTAACTGCTCATCCTGCGATAAGGTTAGAAAAGAAAAGGACCAGAAGAAACATGATAATTGGTGGATTAAAGTTTGCAACAAGATTACTATGGAACCAAATTTCCCAAATGATGAGATCATCGAAATGTACATGTGCAACAATCATGCAATGTTAACTGTAAAAGATACTTTATTAGCATGGGCAGACCCAAAAACTGAACTGGTAGTTGATTTTTTGGCTTATCATCAGTCATGGCAACCGTCTTATGTTCGGCAGCGGATGCTTCCAATGCTGTCTACTGTGTATTTGAGAGAAACGGCTAGAAATCCAACGAAAACTTTGTTAGTCGGGCAATATGAATTTCATTCCATTCAGCGGGTGAAGACAAGATATGGGCACCAATCTTATGTGGTCAAGTGGAAGAAAGCCATATCTGGCGAACTTAGTTGTCCAGGCCCTGTTGAACAGTCCGATATGCAGGAAGAAGAACTTATAGAAGTTGATGATGAGCCCAATGATCTGCTGGATGAGTCCATTGACCCACTGATTCGTATTGATGGCTGCTGGATTTTGACTGATGAAGCTCCGGAGTTAGTTCGTTCAGCTTTTCCAGAGGAAGTCGTCAAGTTTATGCGGGAAAAGGAAATTAAAGAAAAAAGCAGAAGAAAGGCTTCAACTGTAAGAACTGAAGGGTCCCGTGAAATGTCAGATTTGTCAAAACCACAGAGTGTTCAGCTAAATATCACTACATTTTTCCGCTCAACCAAAACACAGTCTCAGGCAAAACCAGGAGAAGATTTAGCTAAGTGTTCCAATAATCCAGGTGATGGGTCATCAAAACAAAAGAGGGAAGTTTCAAGTGCTGGCCTGTCCAAGGCTAGCCAATCTTGTTGGAATATAATCAAGGTAAGAGGTTGTTTAGCAAAAGCAGAGGATAATATTCTCCATATGCATGAATTCTTGTTTGCCATATTATATGTTAACGAACTGGCATTCATGACTGCTAAACGAGCAACTGATGCATTTTGCATCATACAAGACAGGCAGTACAAAATAGATCTTGTCCTAGCAGAAGGCTGCCTGCCTGATATGGATAAATATGAGCTACTTGAGACAATAAAGGAATTGTCTGAGATTCCTGTTATTCTCATGTCTGCCGATAATGATTGGAACACCATCCTTGGTGGCCTCTTCAAAGGTGCTGTATTATACCTTGTTAAACCAATCACCATGGACGATCTTAAAAATCTATGGCAGTTTGCATTCATTAAGGAAAGAGGAAATATGTTTGCTGCTGAGGAGAGTATTCGTACTGAGGAATCATCACTAGAGAACGCATCAGATGTGCATGCAGAGTCTCAACCACATATAAGTGAAGAGAGGCAGAATCACCAAAGTACAAAACGAGAAAGATTAGAAGAACAAGAAAATAATCAGGATGAGAATAATGATGGTTCAGCAGCTCTTAAGAAGCCAAAATTAATTTGGACAGAGGCGCTACACAATAGATTCTTGCAAGCTATCGAAGTACTTGGATTTGATGAAGCTCATCCAAAGAAAATACTTCAGTATATGAATGTCCCTGGACTAAAGAAAGAAAATGTTTCAAGCCATTTACAGAAATATCGTCTCTCCTTGAAACGAGAACAAGATGCAAACAAGAAGACCATGAATAGAGGTTCTACTGCACTACATGTCGCATCTCATCATATTTTGCCTCCATTCAGTCCACAAGAAAGGTCTCTTCAATTTTCAAATCTGCAATTCATGACGGTAGCAGGCCAACCAGTTGCCGATGGCCTTGTTCAGGAGAACCTTAATTGTTGCCTGCCTATGCCTTCCTTTGGTTCTGCAAATCTGCTTAAGCATGTAGGTGCATCGACGATTAAATTTGATCAACAGGCTCTGTGCAATGAACCACTAGCTTCTGCTTATCCTGAATGTAATCTGACTGGTGATGGGATCACCGATAATGAAGGACTGGTTGGTTTTCCTCAGATAGGGGATTTGGAATTGGAACAATTTCTGGAGGGAGAAACTGATCTGTTGAACAATGGAGATTGTGGGTTGGAAAGTTTATTAGATTGCCCAAAAGTAGTTGATAATTCTTTGCAAGAAGAACAACAGCAAGAAGAACAATTTGTGCTACCAGGGCCATTGCAACTGCCTCCACCAGCAAAGGAGCAAGAGGAAGCTGATGTATTCGGGACTGAAGGAGGAACAGAATTTAACGAGGTGTTTACCATGGAAAAAGGAACAGGTCAACTTTTCTTTGACGAGGATTTTGATGATTTTGATGGTTTCTGCTTGATTGGTGACATGGATGCTAGTATAATATGTAAAGCAACATTCCTGAAATATGAATCCAGCGTGAGCTTAGAATCAATGAGAACTGAAGGTAGTTCTTCAGCAATATTGGTTCTGATGGCAAATGGTGATTCGACATGCTATACTATTCTGACCACGATGCTTCAACAAGGCCACCATAGAGTTCTGCACTTTAAAAGCAGTACTGATGCTTTAAAGGCTCTTCAAGAGGAGAAGGCCATACCGGATCTTGTGCTAATGGACGTTGAGATGCCTGATACGAGCAGATTAGAGCTCCTCAAGCGTGTTAAAAAGGAGTTTCAGCTGCCAGCTACATTGATGGCTGCTGATGAGAATGAGGAAATTGTGCTAGGAGGTCTCGATCATGGCCTTTCACTCTACTTTGCAAAATCTTTAAGCCATTACAGTGTGCAGAGGCTCTGGCAGTATGTGTTAGCAACAAGAAAAAGTTTATTGATGAGTGGTGCTACTTATGGTTATGAAGGACCTAAAAGGGAACCACATCTGCAGAAGGTGCAAGGCAAAGATGGTTCTGATCTCTACCCAAAACAGAGGTTTATTTGGACCACAGAGTTGCACAATAAATTCTTGGATGCCATTAAGCAGCTAGAACATGAAAGGATTCTTCCAAAGAAAATACTTGAGCTTATGAATGTTCCTGGCCTAACGAGACTGGTGATTGCAAGTCATTTGCAGAAGTATAGGAAGAACATTCAACGAGAAAAGCAGATGAGATTGTTACCTTGGAGACCAAAATATAGCTTCACATCTTCCATACCTTCCTCAAGTTCAGAATCTGACCAAGTTTATCAGAGTTCAACTTCAACAAAGTCCTGGCCCTACACACGTATGAGAAACCTGGGAAATAAGTTATCATTTTCTGGAAGTAATCAAGGTATCGATCAACTTCGACATCTGAAAATTGCATCCTCTGCTTATAAAATTTCAAACAGCTATAATAATCGGTCAAATTTGGGTACTGGACGATCTACAACTAGCTTCACTGAAGTGCCTTTAACAGGTCAGCAAGGGGACTTTAGAAAAGCTGGTGACTATTATTCTGGCATTAAAAATGTCTGGTTGCTTGGAAATCCTAATGTTGTAAGAAGAAACAGGGCTTCCTACATTGGACGATCCTACTGTAAGAACATTTCTGATTACTATCCTTTAAGATCAAGCAACTCATTTCCACAAGGACGATATGCGCTGCCTCCTTCACTCCCCACTTCTCGGCCACTAGAACAGAATTCAGATCATTTGTTGGCCCTCAGCCGCCTGATGGAGAGTGATGATATTCTTTTGCAACCTGATACTGATAAGTTAAATGCTCTGTATGCTGATTTTTCAAAACTGATCCAGGACCAACCAATGAATTCGGATCATTTGTTGGCCCTCAGCCGTCTGATGGAGAATGATGATATTCCTGAGCAACCTGATACTGATAAGTTGAATGCTCTGTATGCTGATTATTCAAAACTGATCCAGGACCAACCAATGAAGCTTAGATTCAGGGAGCAATTCCACTGTCTCCCGCCAATTTCTTCTTTCACGACCGGTACAGTTCCGGCGTGCAATACCAGTGCCGGCGGGCGAACCCAAACGCCGTCTTCGCTGATAGCGTGCGCGACGAAGAGGAAACAAGATGACGACTACCACGCCACTCTCAAAGCTCTCAACTCCAAAGGCCGCTTCCCTAGAAAATCCCTGGGCCAGCATTACATGTTGAATTCTGAGATTAACGAGCAACTGGCAAGTGCGGCCAATGTAGAAGAAGGTGACGTGGTCCTAGAAATCGGACCGGGAACTGGTTCTTTAACCAATGTTCTTATAAACTCCGGCGCCACCGTTCTCGCCATTGAAAAGGATCCTCACATGGTGGGTCTTGTAAGAGAAAGATTTGAAAGCACGAACCGGTTCAAGGTCTTGCAAGAGGATTTTGTCAAATGTCACATTCGTTCGCATATGTTTCCAATATTAGAAAGTGGAAAGGCTTTGAATCCAAGCTCAACTCGTGCCAAAGTAGTTTCTAACCTACCTTTTAACATAAGCACAGATGTAGTTAAGTTACTTCTTCCCATGGGGGATATGTTCTCTGAAGTAGTTCTCTTGCTTCAGGAGGAAACAGCTGTGCGACTGGTGGAATCATCTTTGCGTACATCTGAGTATCGACCTATCAACATCTTTGTTAATTTTTATTCAGAGCCTGAATACAAGTTCAGTGTTCCAAGAACAAATTTCTTTCCTCAACCAAATGTTGATGCAGCTGTTGTTACATTTAAGCTGAAGCAAGCTCCAGACTATCCTTCTGTGGCGTCCACAAAAAGCTTTTTCTCAATGGTGAATTCCGCATTCAATGGAAAACGTAAAATGTTGAGGAGATCACTCCAGCACATATGTCCATCCGATGAGATTGAAAGAGCTCTTGGAGATGCTGGCCTTCCAACAACTTCAAGACCAGAGGAGCTTACATTAGATGATTTTGTGAAGCTGCATAATCTAATTGCGAGAGTGTAG

Protein:   MGVGGNFWELLKPYARQEGFDFLRDKRVAVDLSYWIVQHETAIKNQATNPHLRLTFFRTINLISKFGAFPVFILDGIPSPLKSQARIARFFRFSGIDTSTLTVVKEGVSKERNSAFLKYVKDCVELLELMGMPVLKAKGEAEALCAQLNKDGYVDACITADSDAFLFGATCVIKCLRPNSKEPIECYRMSDIEAGLGLKRKHLIAISLLVGNDHDLKGVQGIGLDKALRFVRKFSEDEILDKLCQIGKGDLPLFQDGIICMGDVTPCLDDCSPKPKQSHCSFCGHPGSKKSHLKFSCEYCLTDSNVGCLKKSPNFKCNCSSCDKVRKEKDQKKHDNWWIKVCNKITMEPNFPNDEIIEMYMCNNHAMLTVKDTLLAWADPKTELVVDFLAYHQSWQPSYVRQRMLPMLSTVYLRETARNPTKTLLVGQYEFHSIQRVKTRYGHQSYVVKWKKAISGELSCPGPVEQSDMQEEELIEVDDEPNDLLDESIDPLIRIDGCWILTDEAPELVRSAFPEEVVKFMREKEIKEKSRRKASTVRTEGSREMSDLSKPQSVQLNITTFFRSTKTQSQAKPGEDLAKCSNNPGDGSSKQKREVSSAGLSKASQSCWNIIKVRGCLAKAEDNILHMHEFLFAILYVNELAFMTAKRATDAFCIIQDRQYKIDLVLAEGCLPDMDKYELLETIKELSEIPVILMSADNDWNTILGGLFKGAVLYLVKPITMDDLKNLWQFAFIKERGNMFAAEESIRTEESSLENASDVHAESQPHISEERQNHQSTKRERLEEQENNQDENNDGSAALKKPKLIWTEALHNRFLQAIEVLGFDEAHPKKILQYMNVPGLKKENVSSHLQKYRLSLKREQDANKKTMNRGSTALHVASHHILPPFSPQERSLQFSNLQFMTVAGQPVADGLVQENLNCCLPMPSFGSANLLKHVGASTIKFDQQALCNEPLASAYPECNLTGDGITDNEGLVGFPQIGDLELEQFLEGETDLLNNGDCGLESLLDCPKVVDNSLQEEQQQEEQFVLPGPLQLPPPAKEQEEADVFGTEGGTEFNEVFTMEKGTGQLFFDEDFDDFDGFCLIGDMDASIICKATFLKYESSVSLESMRTEGSSSAILVLMANGDSTCYTILTTMLQQGHHRVLHFKSSTDALKALQEEKAIPDLVLMDVEMPDTSRLELLKRVKKEFQLPATLMAADENEEIVLGGLDHGLSLYFAKSLSHYSVQRLWQYVLATRKSLLMSGATYGYEGPKREPHLQKVQGKDGSDLYPKQRFIWTTELHNKFLDAIKQLEHERILPKKILELMNVPGLTRLVIASHLQKYRKNIQREKQMRLLPWRPKYSFTSSIPSSSSESDQVYQSSTSTKSWPYTRMRNLGNKLSFSGSNQGIDQLRHLKIASSAYKISNSYNNRSNLGTGRSTTSFTEVPLTGQQGDFRKAGDYYSGIKNVWLLGNPNVVRRNRASYIGRSYCKNISDYYPLRSSNSFPQGRYALPPSLPTSRPLEQNSDHLLALSRLMESDDILLQPDTDKLNALYADFSKLIQDQPMNSDHLLALSRLMENDDIPEQPDTDKLNALYADYSKLIQDQPMKLRFREQFHCLPPISSFTTGTVPACNTSAGGRTQTPSSLIACATKRKQDDDYHATLKALNSKGRFPRKSLGQHYMLNSEINEQLASAANVEEGDVVLEIGPGTGSLTNVLINSGATVLAIEKDPHMVGLVRERFESTNRFKVLQEDFVKCHIRSHMFPILESGKALNPSSTRAKVVSNLPFNISTDVVKLLLPMGDMFSEVVLLLQEETAVRLVESSLRTSEYRPINIFVNFYSEPEYKFSVPRTNFFPQPNVDAAVVTFKLKQAPDYPSVASTKSFFSMVNSAFNGKRKMLRRSLQHICPSDEIERALGDAGLPTTSRPEELTLDDFVKLHNLIARV